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What does protonated mean?

Looking for the meaning or definition of the word protonated? Here's what it means.

Verb
  1. simple past tense and past participle of protonate
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Examples
In the second basic photocycle step, the chromophore is protonated and structural changes take place in the protein.
On the other hand, in polar conjugated systems such as protonated Schiff bases the funnel shows a structure with just one twisted double bond.
An acetyl group was attached to residue 22 to mimic the preceding peptide bond and the C-terminal carboxylate was protonated.
We postulate that this pathway is blocked when both groups are protonated or deprotonated.
It can react either as an oxidant or a reducing agent, is a very good nucleophile, and is a base that can be protonated.
We present a comparative study of the ultrafast photophysics of all-trans retinal in the protonated Schiff base form in solvents with different polarities and viscosities.

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